Preheat the oven to 350°F (175°C).
In a bowl, combine the graham cracker crumbs and melted butter. Press the mixture into the bottom of cupcake liners in a muffin tin.
In a separate bowl, beat together the cream cheese and sugar until smooth. Add the egg, lime zest, lime juice, and vanilla extract; mix until well combined.
Pour the cheesecake filling over the crusts in the muffin tin.
Bake for 20-25 minutes until set.
While the cupcakes are cooling, make the blueberry topping by simmering the blueberries, sugar, and lime juice in a saucepan until the blueberries burst and the mixture thickens slightly.
Once the cupcakes have cooled, top them with the blueberry sauce.
Refrigerate for at least an hour before serving.